Greencircrna

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August undefined, 2024

WebSelect search scope, currently: catalog all catalog, articles, website, & more in one search; catalog books, media & more in the Stanford Libraries' collections; articles+ journal articles & other e-resources WebNov 11, 2024 · GreenCircRNA is the first database for the prediction of circRNAs that act as miRNA decoys and contains the largest number of plant species. Database URL: …

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WebJan 1, 2024 · Circular RNAs are molecules formed by 3'-5' ligation in a splicing reaction, the so-called backsplicing. Well described in other groups, especially in humans, circRNA studies that include prediction and validation in plants are recent. It has already been shown that circRNAs can interact with microRNAs, acting as sponges, and adding a new layer … WebJul 1, 2024 · GreenCircRNA is a recently published database focused on circRNAs from 69 plant species that act as decoys of miRNA . Moreover, this repository includes basic information about the circRNAs , including their genomic localization, host gene and basal expression values. Besides ... foam board insulation with aluminum foil

Circular RNA Databases SpringerLink

WebGreenCircRNA: a database for plant circRNAs that act as miRNA decoys Jingjing Zhang2,†, Zhiqiang Hao2,† and Shuwei Yin2 and Guanglin Li1,2,* 1Key Laboratory of Ministry of Education for Medicinal Plant Resource and Natural Pharmaceutical Chemistry, Shaanxi Normal University, West Chang’an Street, Xi’an 710062, China. and 2College of … WebJan 1, 2024 · Europe PMC is an archive of life sciences journal literature. WebJul 1, 2024 · GreenCircRNA is the first database for the prediction of circRNAs that act as miRNA decoys and contains the largest number of plant species. Database URL: … foam board insulation with radiant barrier

Constructing CircRNA-miRNA-mRNA Regulatory Networks by …

WebGreenCircRNA(v1.0) is the most comprehensive database containing 213,494 circRNA informations from over 4100 RNA-seq datasets across 69 different species. Based on … WebJul 1, 2024 · Circular RNAs (circRNAs) are a class of endogenous ncRNAs with covalently closed-loop structures, lacking of 5′ caps and 3′ tails. These novel ncRNAs are ubiquitously expressing in eukaryotes, exhibiting expression patterns of specific cell types, tissues, or developmental stages. CircRNAs have been reported to play important roles in ... foam board logoWebCircFunBase (Meng et al., 2024), GreenCircRNA (Zhang et al., 2024), CropCircDB (Wang et al., 2024), and AtCircDB (Ye et al., 2024). Each database has its own pros and cons; the major issues are the limited number of plant species and/or collected circRNAs and the fact that the databases are rarely updated after being released. foam board miniature house

"WebHere, taking Arabidopsis thaliana as an example, we firstly show the method for identification of circRNA and construction of circRNA-miRNA-mRNA networks based on … " - Greencircrna

Greencircrna

WebJan 1, 2024 · Constructing CircRNA-miRNA-mRNA Regulatory Networks by Using GreenCircRNA Database. Jingjing Zhang, Ruiqi Liu, Guanglin Li Methods in Molecular … WebJan 1, 2024 · Constructing CircRNA-miRNA-mRNA Regulatory Networks by Using GreenCircRNA Database. Zhang J, Liu R, Li G. Methods Mol Biol, 2362:173-179, 01 …

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WebHere, taking Arabidopsis thaliana as an example, we firstly show the method for identification of circRNA and construction of circRNA-miRNA-mRNA networks based on GreenCircRNA database, then perform a case study for identifying circRNAs and inferring their function in A. thaliana. Our method can be easily extended and applied to other plants. WebRogerio Margis completed his doctorate at the Institute de Biologie Moleculaire des Plantes, IBMP CNRS, Université Louis Pasteur de Strasbourg I, France, in 1993. In 2002 he finished a postdoctoral on the process of RNA interference and microRNAs in plant production at CSIRO Plant Industry in Canberra, Australia. Currently has a CNPq 1B …

WebJul 11, 2024 · The PMCS is an integrated measurement of genomic and expression conservation with a value up to two; the higher the value, the more conserved the circRNA of interest ( Chu et al., 2024 ). Most circRNAs deposited in PlantcircBase 7.0 have a PMCS of 0.2 to 1.0 ( Figure 3 A ), with 75 circRNAs having a PMCS larger than 1.5. WebContents: Identification and Characterization of Plant Circular RNAs -- Experimental Strategies for Studying the Function of Plant circRNAs -- Generation of Transgenic Rice Expressing circRNA and its Functional Characterization -- Identification of Circular RNAs by Multiple Displacement Amplification and their Involvement in Plant Development ...

WebConstructing CircRNA–miRNA–mRNA Regulatory Networks by Using GreenCircRNA Database . Jingjing Zhang, Ruiqi Liu, Guanglin Li; Pages 173-179. Methods for Predicting CircRNA–miRNA–mRNA Regulatory Networks: GreenCircRNA and PlantCircNet Databases as Study Cases. Nureyev F. Rodrigues, Rogerio Margis; Pages 181-193. WebConstructing CircRNA–miRNA–mRNA Regulatory Networks by Using GreenCircRNA Database . Jingjing Zhang, Ruiqi Liu, Guanglin Li; Pages 173-179. Methods for …

WebJan 1, 2024 · Europe PMC is an archive of life sciences journal literature.

WebIntroduction. The formation of chronic intractable wounds is a common, high incidence complication of diabetes that can be a burden and inconvenience for recipients (1, 2).Although many studies have been carried out on chronic intractable wound disease and pathogenicity (3, 4), few studies have focussed on the gene regulation of chronic … greenwich holiday apartmentsWebJul 1, 2024 · GreenCircRNA is the first database for the prediction of circRNAs that act as miRNA decoys and contains the largest number of plant species. Database URL: … foam board lightboxWebPMID:32655294 GreenCircRNA: a database for plant circRNAs that act as miRNA decoys. PMID:32510565 Development of a sensitive primer extension method for direct detection and quantification of miRNAs from plants. PMID:32163493 Comprehensive analysis of the Gossypium hirsutum L. respiratory burst oxidase homolog (Ghrboh) gene family. greenwich holiday lighted tractor paradeWebMethods for Predicting CircRNA-miRNA-mRNA Regulatory Networks: GreenCircRNA and PlantCircNet Databases as Study Cases Methods Mol Biol. 2024;2362:181-193. doi: … foam board model railway baseboardWebFeb 14, 2024 · The functional study on circRNAs has been increasing in the past decade due to its important roles in micro RNA sponge, protein coding, the initiation, and progression of diseases. The study of circRNA functions depends on the full-length sequences of circRNA, and current sequence assembly methods based on short reads … greenwich holiday strollWebHere, taking Arabidopsis thaliana as an example, we firstly show the method for identification of circRNA and construction of circRNA-miRNA-mRNA networks based on … greenwich home based rehab referral formWebJul 1, 2024 · Here, taking Arabidopsis thaliana as an example, we firstly show the method for identification of circRNA and construction of circRNA–miRNA–mRNA networks based … foam board model railroad benchwork