Cymbidium genome size

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August undefined, 2024

WebFeb 14, 2024 · Font Size: Aa Aa Aa. Line Spacing: ... Here, 94 bHLH transcription factors were identified from the Cymbidium ensifolium genome and divided into 18 subfamilies. Most CebHLHs contain numerous cis-acting elements associated with abiotic stress responses and phytohormone responses. WebSep 1, 2024 · The estimated genome size was 1.38 Gb with 1.84% heterozygosity, as determined by K-mer analysis (Supplementary Fig. 1). To obtain a better assembly, PacBio technology was employed, ...

Complete chloroplast genome of the genus Cymbidium

WebAug 1, 2024 · The sequencing of Cymbidium sinense genome showed how the orchid phenotypic traits evolved, providing a platform for breeding studies (Yang et al., 2024) … WebApr 10, 2024 · Single-Copy Orthologs (SCOs) improve species discrimination: A case study in subgus Jensoa (Cymbidium) diamond bar news today

Creating novel ornamentals via new strategies in the era of genome …

WebNov 24, 2014 · The Cymbidium genome reveals the evolution of unique morphological traits. 01 December 2024. Ye Ai, ... Its genome size is estimated to be 1.6 × 10 9 bp per … WebApr 18, 2013 · The cp genome of Cymbidium evolved moderately with more than 3% sequence divergence, ... Wolf PG, DePamphilis CW, Boore JL, Goffinet B: Functional … diamond bar optometry

The genome sequence of the orchid Phalaenopsis equestris

Complete chloroplast genome of the genus Cymbidium - BioMed …

WebOct 23, 2024 · Cymbidium goeringii, commonly known as the spring orchid, has long been favoured for horticultural purposes in Asian countries.It is a popular orchid with much demand for improvement and development for its valuable varieties. Until now, its reference genome has not been published despite its popularity and conservation efforts. WebJul 3, 2024 · size of the C. dayanum chloroplast genome is 155,408 bp, with an average GC content of 36.76%. This chloroplast genome has containing a large single-cop y (LSC) … circle tooth sharkWebDec 31, 2013 · Introduction. Cymbidium ensifolium, is a diploid plant with an estimated haploid genome size of 4,000 Mb and 2n = 2x = 40 chromosomes [1,2]. C. ensifolium … circle top window grids

"WebAug 3, 2024 · The genome comparison among different orchid plants, including genome size, assembly information and gene family evolution, are listed in detail in Figure S6. … " - Cymbidium genome size

Cymbidium genome size

The genome of Cymbidium sinense revealed the evolution of …

Webgenome size (Table S5). The length of the pseudochromosomes ranged from 72.95 to 376.78 Mb, suggesting the Hi-C assembly was of high quality (Table S6; Figure S2). In … WebCymbidium goeringii is a diploid and nonrewarding, bumblebee-pollinated species, which is distributed in China, ... Ackerman J D (2001). Gene flow and effective population size in Lepanthes (Orchidaceae): A case for genetic drift. Biological Journal of the Linnean Society, 72: 47–62. Article Google Scholar Wang S, Xie Y (2004).

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WebAbstract. Common bean (Phaseolus vulgaris L.) is the most important grain legume for human consumption and has a role in sustainable agriculture owing to its ability to fix … WebJun 4, 2015 · Transcriptome Characterization of Cymbidium sinense 'Dharma' Using 454 Pyrosequencing and Its Application in the Identification of Genes Associated with Leaf Color Variation June 2015 PLoS ONE 10 ...

WebJun 11, 2024 · The complete cp genome was assembled using SPAdes v3.10.1 (Bankevich et al. Citation 2012) and genome annotation was performed with Geneious ver. 10.1 … WebDec 23, 2024 · The Cymbidium genome reveals the evolution of unique morphological traits. Horticulture Research. 2024, 8(1): 255. History Assembly Accession Assembly Name Assembly Level Release Date ... Genome size (bp) 3,623,198,571: GC content: 33.58%: Scaffold sequence No. 26,303: Maximum scaffold sequence length (bp) 208,335,477:

WebApr 18, 2013 · Results. The complete nucleotide sequences of eight individuals from a total of five Cymbidium species’ chloroplast (cp) genomes were determined using Illumina sequencing technology of the total DNA via a combination of de novo and reference-guided assembly. The length of the Cymbidium cp genome is about 155 kb. The cp genomes … WebJul 7, 2024 · Transcription factors (TFs) of the WRKY family play pivotal roles in defense responses and secondary metabolism of plants. Although WRKY TFs are well documented in numerous plant species, no study has performed a genome-wide investigation of the WRKY gene family in Cymbidium sinense. In the present work, we found 64 C. sinense …

WebIndeed the first orchid to have its genome size estimated (a Cymbidium hybrid) was reported in 1975 (Capesius et al., 1975), nearly 25 years after the first genome size estimate for a plant was reported (Ogur et al., 1951).

WebJul 11, 2024 · Here, we report on the first complete chloroplast (cp) genome of C. ensifolium. Its full-length of 150,257 bp include large single-copy (LSC) region of 85,110 bp, small single-copy (SSC) region of 13,761 bp, and a pair of invert repeats (IR) regions of 25,692 bp. Plastid genome contain 137 genes, 78 protein-coding genes, 38 tRNA genes, and 8 ... circle top window shuttersWebMay 1, 2024 · In general, plastomes are slightly larger in epiphytes compared with terrestrial and mycoheterotrophic orchids (Fig. 1), with genome sizes ranging from 149,728 bp in … circle top bar stool no backingWebSupplemental Fig. S1 Genome size and heterozygosity estimation using 19 K-mer distribution. ... Chen J, Zhang D, et al. 2024. The Cymbidium genome reveals the … diamond bar population 2020